Publications Print Bryan A, Shields-Pruiett M, Berger H, Fang FC, Penewit K, Waalkes A, Holmes EA, Salipante SJ, Werth BJ. In vitro susceptibility of Stenotrophomonas maltophilia and other carbapenem non-susceptible Gram-negative rods in the Pacific Northwest to cefiderocol and aztreonam-avibactam. JAC Antimicrob Resist. 2026 Jun; 8 (3):dlag105 Epub 2026 June 08 View PubMed Dickinson DT, Ilges D, Kobic E, Bryan A. AMRrounds: Metallo-ß-lactamase-producing Klebsiella pneumoniae complex-everything and the kitchen zinc. JAC Antimicrob Resist. 2025 Oct; 7(5):dlaf187. Epub 2025 Oct 13. View PubMed Bryan A, Grys TE, Graf EH. So I Guess I Am a Device? Making the Case for Professional Practice in the Context of the FDA's Final Rule on Laboratory-Developed Tests. J Appl Lab Med. 2025 Mar 3; 10 (2):517-519 View PubMed Graf EH, Bryan A, Bowers M, Grys TE. One Size Fits Small: The Narrow Utility for Plasma Metagenomics. J Appl Lab Med. 2025 Jan 3; 10 (1):171-183 View PubMed Durowoju LK, Hasan RA, Hess JR, Sabath DE, Bryan A, Pagano MB, Tsang HC. Massive fetomaternal hemorrhage from placental abruption presenting as weak-D expression. Transfusion. 2024 Oct; 64 (10):1820-1821 Epub 2024 Aug 19 View PubMed Saingam P, Jain T, Woicik A, Li B, Candry P, Redcorn R, Wang S, Himmelfarb J, Bryan A, Winkler MKH, Gattuso M. Integrating socio-economic vulnerability factors improves neighborhood-scale wastewater-based epidemiology for public health applications. Water Res. 2024 May 1; 254:121415 Epub 2024 Mar 06 View PubMed Treger RS, Mathias PC, Cowan AJ, Green D, Hutchinson K, Bryan A, Chaudhary A, Fink SL, Wener MH, Morishima C. Data analytics improves the diagnostic accuracy of serum free light chain results for detecting monoclonal gammopathy. Am J Clin Pathol. 2023 Nov 4 Epub 2023 Nov 04 View PubMed Adissu W, Brito M, Garbin E, Macedo M, Monteiro W, Mukherjee SK, Myburg J, Alam MS, Bancone G, Bansil P, Pal S, Sharma A, Zobrist S, Bryan A, Chu CS, Das S, Domingo GJ, Hann A, Kublin J, Lacerda MVG, Layton M, Ley B, Murphy SC, Nosten F, Pereira D, Price RN, Talukdar A, Yilma D, Gerth-Guyette E. Clinical performance validation of the STANDARD G6PD test: A multi-country pooled analysis. PLoS Negl Trop Dis. 2023 Oct; 17 (10):e0011652 Epub 2023 Oct 12 View PubMed Saingam P, Li B, Nguyen Quoc B, Jain T, Bryan A, Winkler MKH. Wastewater surveillance of SARS-CoV-2 at intra-city level demonstrated high resolution in tracking COVID-19 and calibration using chemical indicators. Sci Total Environ. 2023 Mar 25; 866:161467 Epub 2023 Jan 07 View PubMed Long DR, Penewit K, Lo HY, Almazan J, Holmes EA, Bryan AB, Wolter DJ, Lewis JD, Waalkes A, Salipante SJ. In Vitro Selection Identifies Staphylococcus aureus Genes Influencing Biofilm Formation. Infect Immun. 2023 Mar 15; 91 (3):e0053822 Epub 2023 Feb 27 View PubMed Brown HM, Farnsworth CW, Bryan A, Genzen JR, Gronowski A, Philips Deeter J, Yarbrough M. One Bad Apple Can Spoil the Bunch: The Impact of Contamination in the Clinical Laboratory. Clin Chem. 2023 Jan 4; 69 (1):9-16 View PubMed Nguyen Quoc B, Saingam P, RedCorn R, Carter JA, Jain T, Candry P, Gattuso M, Huang MW, Greninger AL, Meschke JS, Bryan A, Winkler MKH. Case Study: Impact of Diurnal Variations and Stormwater Dilution on SARS-CoV-2 RNA Signal Intensity at Neighborhood Scale Wastewater Pumping Stations. ACS ES T Water. 2022 Nov 11; 2 (11):1964-1975 Epub 2022 June 22 View PubMed Werth BJ, Ashford NK, Penewit K, Waalkes A, Holmes EA, Bryan A, Salipante SJ. Evolution of cefiderocol resistance in Stenotrophomonas maltophilia using in vitro serial passage techniques. JAC Antimicrob Resist. 2022 Mar; 4 (1):dlac011 Epub 2022 Feb 08 View PubMed Bosch DE, Salipante SJ, Schmidt RA, Swanson PE, Bryan A, SenGupta DJ, Truong CD, Yeh MM. Neutrophilic inflammation in gallbladder carcinoma correlates with patient survival: A case-control study. Ann Diagn Pathol. 2022 Feb; 56:151845 Epub 2021 Oct 30 View PubMed Mani NS, Lan KF, Jain R, Bryson-Cahn C, Lynch JB, Krantz EM, Bryan A, Liu C, Chan JD, Pottinger PS, Kim HN. Postprescription Review With Threat of Infectious Disease Consultation and Sustained Reduction in Meropenem Use Over Four Years. Clin Infect Dis. 2021 Dec 6; 73 (11):e4515-e4520 View PubMed Lind ML, Roncaioli S, Liu C, Bryan A, Sweet A, Tverdek F, Sorror M. Are hematopoietic cell transplant recipients with Gram-negative bacteremia spending more time outpatient while on intravenous antibiotics? Addressing trends over 10 years at a single center. Immun Inflamm Dis. 2021 Dec; 9 (4):1786-1794 Epub 2021 July 21 View PubMed Buskin SE, Erly SJ, Glick SN, Lechtenberg RJ, Kerani RP, Herbeck JT, Dombrowski JC, Bennett AB, Slaughter FA, Barry MP, Neme S, Quinnan-Hostein L, Bryan A, Golden MR. Detection and Response to an HIV Cluster: People Living Homeless and Using Drugs in Seattle, Washington. Am J Prev Med. 2021 Nov; 61 (5 Suppl 1):S160-S169 View PubMed Lieberman JA, Bryan A, Mays JA, Stephens K, Kurosawa K, Mathias PC, SenGupta D, Bourassa L, Salipante SJ, Cookson BT. High Clinical Impact of Broad-Range Fungal PCR in Suspected Fungal Sinusitis. J Clin Microbiol. 2021 Oct 19; 59 (11):e0095521 Epub 2021 Aug 18 View PubMed Chung SH, Wener M, Bays AM, Rahbar H, Morishima C, Bryan AB, Fink SL, Cohen S, Mani NS, Chaudhary A, Gardner GC. Correspondence on "SARS-CoV-2 vaccination in rituximab-treated patients: evidence for impaired humoral but inducible cellular immune response" by Bonelli et al. Ann Rheum Dis 2021 Oct; 80 (10):e165 Epub 2021 Aug 02 View PubMed Bradley BT, Bryan A, Fink SL, Goecker EA, Roychoudhury P, Huang ML, Zhu H, Chaudhary A, Madarampalli B, Lu JYC, Strand K, Whimbey E, Bryson-Cahn C, Schippers A, Mani NS, Pepper G, Jerome KR, Morishima C, Coombs RW, Wener M, Cohen S, Greninger AL. Anti-SARS-CoV-2 Antibody Levels Measured by the AdviseDx SARS-CoV-2 Assay Are Concordant with Previously Available Serologic Assays but Are Not Fully Predictive of Sterilizing Immunity. J Clin Microbiol. 2021 Aug 18; 59 (9):e0098921 View PubMed Bosch DE, Mathias PC, Krumm N, Bryan A, Fang FC, Greninger AL. Elevated White Blood Cell Count Does Not Predict Clostridium difficile Nucleic Acid Testing Results. Clin Infect Dis. 2021 Aug 16; 73 (4):699-705 View PubMed Cornish NE, Anderson NL, Arambula DG, Arduino MJ, Bryan A, Burton NC, Chen B, Dickson BA, Giri JG, Griffith NK, Pentella MA, Salerno RM, Sandhu P, Snyder JW, Tormey CA, Wagar EA, Weirich EG, Campbell S. Clinical Laboratory Biosafety Gaps: Lessons Learned from Past Outbreaks Reveal a Path to a Safer Future. Clin Microbiol Rev. 2021 Jun 16; 34 (3):e0012618 Epub 2021 June 09 View PubMed LaCourse SM, Kachikis A, Blain M, Simmons LE, Mays JA, Pattison AD, Salerno CC, McCartney SA, Kretzer NM, Resnick R, Shay RL, Savitsky LM, Curtin AC, Huebner EM, Ma KK, Delaney S, Delgado C, Schippers A, Munson J, Pottinger PS, Cohen S, Neme S, Bourassa L, Bryan A, Greninger A, Jerome KR, Roxby AC, Lokken E, Cheng E, Adams Waldorf KM, Hitti J. Low Prevalence of Severe Acute Respiratory Syndrome Coronavirus 2 Among Pregnant and Postpartum Patients With Universal Screening in Seattle, Washington. Clin Infect Dis. 2021 Mar 1; 72 (5):869-872 View PubMed Boonyaratanakornkit J, Morishima C, Selke S, Zamora D, McGuffin S, Shapiro AE, Campbell VL, McClurkan CL, Jing L, Gross R, Liang J, Postnikova E, Mazur S, Lukin VV, Chaudhary A, Das MK, Fink SL, Bryan A, Greninger AL, Jerome KR, Holbrook MR, Gernsheimer TB, Wener MH, Wald A, Koelle DM. Clinical, laboratory, and temporal predictors of neutralizing antibodies against SARS-CoV-2 among COVID-19 convalescent plasma donor candidates. J Clin Invest. 2021 Feb 1; 131 (3) View PubMed Bhattacharyya P, Bryan A, Atluri V, Ma J, Durowoju L, Bandhlish A, Boonyaratanakornkit J. Fatal infection with enterocolitis from methicillin-resistant Staphylococcus aureus and the continued value of culture in the era of molecular diagnostics. Leuk Res Rep. 2021; 15:100254 Epub 2021 May 24 View PubMed Pal S, Myburgh J, Bansil P, Hann A, Robertson L, Gerth-Guyette E, Ambler G, Bizilj G, Kahn M, Zobrist S, Manis MR, Styke NA, Allan V, Ansbro R, Akingbade T, Bryan A, Murphy SC, Kublin JG, Layton M, Domingo GJ. Reference and point-of-care testing for G6PD deficiency: Blood disorder interference, contrived specimens, and fingerstick equivalence and precision. PLoS One. 2021; 16 (9):e0257560 Epub 2021 Sept 20 View PubMed Mani NS, Budak JZ, Lan KF, Bryson-Cahn C, Zelikoff A, Barker GEC, Grant CW, Hart K, Barbee CJ, Sandoval MD, Dostal CL, Corcorran M, Ungerleider HM, Gates JO, Olin SV, Bryan A, Hoffman NG, Marquis SR, Harvey ML, Nasenbeny K, Mertens K, Chew LD, Greninger AL, Jerome KR, Pottinger PS, Dellit TH, Liu C, Pergam SA, Neme S, Lynch JB, Kim HN, Cohen SA. Prevalence of Coronavirus Disease 2019 Infection and Outcomes Among Symptomatic Healthcare Workers in Seattle, Washington. Clin Infect Dis. 2020 Dec 17; 71 (10):2702-2707 View PubMed Bryan A, Fink SL, Gattuso MA, Pepper G, Chaudhary A, Wener MH, Morishima C, Jerome KR, Mathias PC, Greninger AL. SARS-CoV-2 Viral Load on Admission Is Associated With 30-Day Mortality. Open Forum Infect Dis. 2020 Dec; 7 (12):ofaa535 Epub 2020 Nov 03 View PubMed Rassoulian Barrett S, Hoffman NG, Rosenthal C, Bryan A, Marshall DA, Lieberman J, Greninger AL, Peddu V, Cookson BT, Salipante SJ. Sensitive Identification of Bacterial DNA in Clinical Specimens by Broad-Range 16S rRNA Gene Enrichment. J Clin Microbiol. 2020 Nov 18; 58 (12) View PubMed Greninger AL, Addetia A, Starr K, Cybulski RJ, Stewart MK, Salipante SJ, Bryan AB, Cookson B, Gaudreau C, Bekal S, Fang FC. International Spread of Multidrug-Resistant Campylobacter coli in Men Who Have Sex With Men in Washington State and Quebec, 2015-2018. Clin Infect Dis. 2020 Nov 5; 71 (8):1896-1904 View PubMed McAulay K, Bryan A, Greninger AL, Grill F, Lake D, Kaleta EJ, Grys TE. Retrospective clinical evaluation of 4 lateral flow assays for the detection of SARS-CoV-2 IgG. Diagn Microbiol Infect Dis. 2020 Nov; 98 (3):115161 Epub 2020 Aug 02 View PubMed Das MK, Chaudhary A, Bryan A, Wener MH, Fink SL, Morishima C. Rapid Screening Evaluation of SARS-CoV-2 IgG Assays Using Z-Scores to Standardize Results. Emerg Infect Dis 2020 Oct; 26 (10):2501-2503 Epub 2020 July 29 View PubMed Liu C, Lan K, Krantz EM, Kim HN, Zier J, Bryson-Cahn C, Chan JD, Jain R, Lynch JB, Pergam SA, Pottinger PS, Sweet A, Whimbey E, Bryan A. Improving Appropriate Diagnosis of Clostridioides difficile Infection Through an Enteric Pathogen Order Set With Computerized Clinical Decision Support: An Interrupted Time Series Analysis. Open Forum Infect Dis. 2020 Oct; 7 (10):ofaa366 Epub 2020 Aug 21 View PubMed Bryan A, Pepper G, Wener MH, Fink SL, Morishima C, Chaudhary A, Jerome KR, Mathias PC, Greninger AL. Performance Characteristics of the Abbott Architect SARS-CoV-2 IgG Assay and Seroprevalence in Boise, Idaho. J Clin Microbiol. 2020 Jul 23; 58 (8) Epub 2020 July 23 View PubMed Bosch DE, Krumm N, Wener MH, Yeh MM, Truong CD, Reddi DM, Liu Y, Swanson PE, Schmidt RA, Bryan A. Serology Is More Sensitive Than Urea Breath Test or Stool Antigen for the Initial Diagnosis of Helicobacter pylori Gastritis When Compared With Histopathology. Am J Clin Pathol. 2020 Jul 7; 154 (2):255-265 View PubMed Lerma LA, Chaudhary A, Bryan A, Morishima C, Wener MH, Fink SL. Prevalence of autoantibody responses in acute coronavirus disease 2019 (COVID-19). J Transl Autoimmun. 2020; 3:100073 Epub 2020 Nov 27 View PubMed Bradley BT, Bryan A. Emerging respiratory infections: The infectious disease pathology of SARS, MERS, pandemic influenza, and Legionella. Semin Diagn Pathol. 2019 May; 36 (3):152-159 Epub 2019 Apr 17 View PubMed Stewart J, Snoeyenbos Newman G, Jain R, Bryan A, Berger H, Montenovo M, Bakthavatsalam R, Kling CE, Sibulesky L, Shalhub S, Limaye AP, Fisher CE, Rakita RM. Transplant tourism complicated by life-threatening New Delhi metallo-beta-lactamase-1 infection. Am J Transplant. 2019 Apr; 19 (4):1224-1228 Epub 2018 Oct 29 View PubMed Cybulski RJ Jr, Bateman AC, Bourassa L, Bryan A, Beail B, Matsumoto J, Cookson BT, Fang FC. Clinical Impact of a Multiplex Gastrointestinal Polymerase Chain Reaction Panel in Patients With Acute Gastroenteritis. Clin Infect Dis. 2018 Nov 13; 67 (11):1688-1696 View PubMed MacAllister TJ, Stohs E, Liu C, Bryan A, Whimbey E, Phipps A, Pergam SA. 10-year trends in vancomycin-resistant enterococci among allogeneic hematopoietic cell transplant recipients. J Infect. 2018 Jul; 77 (1):38-46 Epub 2018 May 07 View PubMed Nakagawa R, Jain R, Bryan AB, Chan JD. Optimization of antimicrobial therapy in vancomycin-resistant enterococcal bacteraemia using a rapid detection Gram-positive blood culture assay. J Hosp Infect. 2018 Jun; 99 (2):153-157 Epub 2017 Dec 16 View PubMed Flanagan ME, Andeen N, Lieberman J, Freeburg J, Williams JR, Hoogestraat DR, Bryan A, Sabath DE. An unusual case of a young patient with Whipple's disease involving the central nervous system. Clin Neuropathol 2017 Jul-Aug; 36 (4):199-204 View PubMed Malakzai MO, Sahak JG, Campbell R, Abobakar M, Hoogestraat DR, SenGupta DJ, Bryan A, Gardner JM. Multifocal but non-disseminated phaeohyphomycosis in a healthy man via a unique mechanism: Ejection from motor vehicle accident into a vegetable field in Afghanistan resulting in multiple contaminated skin wounds. J Cutan Pathol. 2017 Jul; 44 (7):620-624 Epub 2017 Apr 25 View PubMed Bryan A, Kirkpatrick LM, Manaloor JJ, Salipante SJ. 16S rRNA deep sequencing identifies Actinotignum schaalii as the major component of a polymicrobial intra-abdominal infection and implicates a urinary source. JMM Case Rep. 2017 May; 4 (5):e005091 Epub 2017 May 03 View PubMed Bryan A, Cook L, Atienza EE, Kuypers J, Cent A, Baird GS, Coombs RW, Jerome KR, Wener MH, Butler-Wu SM. Bloodborne Viral Pathogen Contamination in the Era of Laboratory Automation. Clin Chem. 2016 Jul; 62 (7):973-81 Epub 2016 May 19 View PubMed Edwards RL, Bryan A, Jules M, Harada K, Buchrieser C, Swanson MS. Nicotinic acid modulates Legionella pneumophila gene expression and induces virulence traits. Infect Immun. 2013 Mar; 81 (3):945-55 Epub 2013 Jan 14 View PubMed Bryan A, Abbott ZD, Swanson MS. Constructing unmarked gene deletions in Legionella pneumophila. Methods Mol Biol. 2013; 954:197-212 View PubMed Bryan A, Swanson MS. Oligonucleotides stimulate genomic alterations of Legionella pneumophila. Mol Microbiol. 2011 Apr; 80 (1):231-47 Epub 2011 Feb 24 View PubMed Bryan A, Harada K, Swanson MS. Efficient generation of unmarked deletions in Legionella pneumophila. Appl Environ Microbiol. 2011 Apr; 77 (7):2545-8 Epub 2011 Feb 04 View PubMed Xu L, Shen X, Bryan A, Banga S, Swanson MS, Luo ZQ. Inhibition of host vacuolar H+-ATPase activity by a Legionella pneumophila effector. PLoS Pathog. 2010 Mar 19; 6 (3):e1000822 View PubMed Bryan A, Roesch P, Davis L, Moritz R, Pellett S, Welch RA. Regulation of type 1 fimbriae by unlinked FimB- and FimE-like recombinases in uropathogenic Escherichia coli strain CFT073. Infect Immun. 2006 Feb; 74 (2):1072-83 View PubMed Bryan A, Shapir N, Sadowsky MJ. Frequency and distribution of tetracycline resistance genes in genetically diverse, nonselected, and nonclinical Escherichia coli strains isolated from diverse human and animal sources. 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